Pilsen Summer School of Single Cell

from the lab to data analysis

September 2 – 10, 2026, Pilsen, Czech Republic

Charles University, University of West Bohemia, Medical University of Vienna, London South Bank University, University of Warsaw, Nencki Institute

Invitation

We would like to invite you to join our unique Summer School of Single Cell, which covers all the key steps in immune cell processing, sample preparation for single cell sequencing, and data analysis.

This nine-day intensive, hands-on course focuses on experimental design, sample selection and preparation, quality control, sequencing, understanding NGS data formats, sequence editing, read mapping, data interpretation and troubleshooting.

The Summer School was established through the long-term collaboration between Charles University and the University of West Bohemia, as well as with London South Bank University, the Medical University of Vienna, the University of Warsaw, the University of Pennsylvania, and CiRT consortium.

We look forward to seeing you in Pilsen.